Poster Presentations

Monday, August 18, 2008

The Animal Microbiome

0356
SOUVENIRS OR HEIRLOOMS? THE PHYLOGEOGRAPHY OF ADELIE PENGUIN FAECAL FLORA
J.C. Banks, S.C. Cary, I.D. Hogg
University of Waikato, Department of Biological Sciences, Hamilton, New Zealand

0357
WHY DO SHEEP HAVE SMELLY FEET? “THE MICROBIOME OF FOOTROT”
L.A. Calvo-Bado¹, M. Kenny², R. Grogono-Thomas², L.J. Moore², J. Kaler¹, G. Medley¹, L. Green¹, E.M.H. Wellington^1
1University of Warwick, Department of Biological Sciences, Coventry, United Kingdom, ²University of Bristol, School of Clinical Veterinary Science, Bristol, United Kingdom

0358
MULTILOCUS SEQUENCE ANALYSIS AS A TOOL FOR IDENTIFICATION OF PATHOGENIC VIBRIOS FROM THE LARVAL REARING SYSTEM OF THE TROPICAL ROCK LOBSTER PANULIRUS ORNATUS
A. Cano Gomez¹, M.R. Hall², L. Owens¹, D.G. Bourne², L. Høj^2
1James Cook University, School of Veterinary and Biomedical Sciences, Townsville, Australia, ²Australian Institute of Marine Science, Townsville, Australia

0359
SUCCESSION OF METHANOGENIC AND CELLULOLYITIC MICROBIAL COMMUNITIES IN DAIRY COWS RELATED TO DIET AND LACTATION STAGE
H. Castillo, A. Corral, D. Dominguez, G. Villalobos
Universidad Autonoma de Chihuahua, Facultad de Zootecnia, Chihuahua, Mexico

0360
DIVERSITY OF MICROBIAL FLORA IN PORCINE FECAL SAMPLES
K.-K. Cho¹, M.A. Jeong¹, C.H. Yun², S.H. Kang³, B.U. Kim^1
1Jinju National University, Department of Animal Resources Technology, Jinju, Korea, Republic of, ²Seoul National University, Department of Agricultural Biotechnology, Seoul, Korea, Republic of, ³Livestock Industry, CSIRO, Brisbane, Australia

0361
DIETS HIGH IN RED OR WHITE MEATS RESULT IN SIMILAR FAECAL MICROBIAL PROFILES IN RATS BUT PROFILES ARE ALTERED BY DIETARY HIGH AMYLOSE MAIZE STARCH
M. Conlon, S. Toden, M. Vuaran, A. Bird, C. Christophersen, D. Topping
Food Futures National Research Flagship, CSIRO Human Nutrition, Adelaide, Australia

0362
CULTURE INDEPENDENT ANALYSIS OF 'SYNERGISTES' LIKE BACTERIA CAPABLE OF DEHALOGENATION
C.K. Davis¹, S.E. Denman¹, L. Sly², C.S. McSweeney^1
1CSIRO, Livestock Industries, St Lucia, Australia, ²University of Queensland, School of Molecular and Microbial Sciences, St Lucia, Australia

0363
PHYLOGENETIC AND FUNCTIONAL ANALYSIS OF BACTERIAL POPULATIONS INVOLVED IN ALTERNATIVE HYDROGEN-UTILISING PATHWAYS FROM THE CATTLE RUMEN
S. Denman¹, J. Padmanabha¹, S. Zadbuke², D. Kamra², M. Morrison¹, C. Mc Sweeney^1
1CSIRO, Livestock Industries, Brisbane, Australia, ²Indian Veterinary Research Institute, Izatnagar, India

0364
THE DIVERSITY AND ABUNDANCE OF METHANOGENS IN THE FOREGUT STOMACH OF TAMAR WALLABIES
P. Evans¹, L. Hinds², C. McSweeny¹, M. Morrison¹, A.-D. Wright^1
1CSIRO, Livestock Industries, Brisbane, Australia, ²CSIRO, Entomology, Canberra, Australia

0365
ANALYS OF PREBIOTIC ACTIVITIES OF BREWER´S YEAST CELL WALL ON SWINE GUT MICLOFLORA USING CONTINUOUS-FLOW ANAEROBIC REACTOR SYSTEM
K. Watanabe¹, A. Michinaka², N. Nishio¹, Y. Nakashimada¹, T. Fujii^2
1Graduate School of Advanced Sciences of Matter, Hiroshima University, Department of Molecular Biotechnology, Higashi-Hiroshima, Japan, ²Central Laboratories for Frontier Technology, Kirin Holdings, Yokohama, Japan

0366
NOVEL PARTIAL GENE SEQUENCES FROM AUTHENTIC HOMOACETOGENS
E. Gagen¹, S. Denman¹, R. Al Jassim², C. McSweeney^1
1CSIRO, Livestock Industries, St Lucia, Australia, ²School of Animal Studies, The University of Queensland, Gatton Campus, Australia

0367
ACTINOMYCETES WITHIN TERMITE COLONIES: ANTIFUNGAL COMPOUNDS MAY BENEFIT ZOOTERMOPSIS ANGUSTICOLLIS
E. Gavrish¹, C. Moore², R. Zeid³, R. Rosengaus³, K. Lewis^1
1Antimicrobial Discovery Center, Northeastern University, Biology Department, Boston, United States of America, ²NovoBiotic Pharmaceuticals, Cambrigde, United States of America, ³Northeastern University, Biology Department, Boston, United States of America

0368
THE EFFECTS OF LONG-TERM CULTIVATION OF APLYSINA AEROPHOBA UNDER ARTIFICIALCONDITIONS ON THE ASSOCIATED BACTERIA
B. Gerçe¹, T. Schwartz², M. Voigt¹, S. Rühle¹, S. Kirchen², A. Putz³, P. Proksch³, U. Obst², C. Syldatk¹, R. Hausmann^1
1University of Karlsruhe (TH), Institute of Engineering in Life Sciences, Chair of Technical Biology, Karlsruhe, Germany, ²Forschungszentrum Karlsruhe, The Institute for Technical Chemistry - Water Technology and Geotechnology Division, Karlsruhe, Germany, ³Heinrich-Heine-University, Institute of Pharmaceutical Biology and Biotechnology, Düsseldorf, Germany

0369
DEVELOPMENTAL MICROBIAL ECOLOGY IN THE CROP OF THE HOATZIN, A SOUTH AMERICAN LEAF-EATING BIRD
F. Godoy-Vitorino¹, E. L. Brodie², K. C. Goldfarb², M. A. Garcia-Amado³, F. Michelangeli³, M. G. Dominguez-Bello^1
1University of Puerto Rico - Rio Piedras Campus, Biology, San Juan, Puerto Rico, ²Lawrence Berkeley National Laboratory, Molecular Microbial Ecology Group, Berkeley, United States of America, ³Venezuela Institute of Scientific Research, Caracas, Venezuela

0370
DEVELOPMENT OF PROBIOTICS FOR USE IN LARVAL REARING SYSTEMS OF THE ORNATE ROCK LOBSTER PANULIRUS ORNATUS
E. Goulden¹, M. Wietz¹, M. Hall¹, D. Bourne¹, L. Pereg-Gerk², L. Høj^1
1Australian Institute of Marine Science, Townsville, Australia, ²University of New England, Armidale, Australia

0371
THE DISTRIBUTION, PATHOGENICITY AND DRUG RESISTANCE OF STREPTOCOCCUS SUIS SEROTYPE 2 IN HEALTH PIG HERDS IN THE SPRING AND SUMMER IN JILIN PROVINCE, CHINA
C. Sun¹, L. Lei¹, X. Cai², R. Zhao¹, S. Zhu¹, L. Jiang¹, S. Lv¹, W. Han^1
1Jinlin University, College of Animal Science and Veterinary Medicine, Changchun, China, ²Harbin Veterinary Research Institute, Division of Swine Infectious Diseases, National Key Laboratory of Veterinary Biotechnology, Harbin, China

0372
COMPLETE GENOME OF THE UNCULTURED "TERMITE GROUP 1" BACTERIA IN A SINGLE HOST PROTIST CELL
Y. Hongoh¹, V. Sharma², T. Prakash², A. Toyoda², M. Hattori², M. Ohkuma^1
1RIKEN, Environmental Molecular Biology Lab., Wako, Japan, ²RIKEN, Genomic Sciences Center, Yokohama, Japan

0373
SELECTION OF MARINE BACTERIA THAT ENHANCE THE DIGESTION OF SEAWEED OF ABALONE HALIOTIS RUFESCENS IN THE NORTH OF CHILE
C.D. Infante, F. Silva-Aciares, A. Moreno, Y. Luza, C. Riquelme S
Universidad de Antofagasta, Laboratorio de Ecología Microbiana, Antofagasta, Chile

0374
COMPARATIVE RNA BASED ANALYSIS OF THE MICROBIAL DIVERSITY IN THE RUMEN SUGGESTS THAT THE PROTEOBACTERIA ARE A HIGHLY ACTIVE GROUP
S. Kang¹, S.E. Denman¹, M. Morrison¹, Z. Yu², C.S. McSweeney^1
1CSIRO, Livestock Industry, Brisbane, Australia, ²Ohio State University, Animal Science, Columbus, United States of America

0375
METABOLIC PATHWAY ANALYSIS IN A CLOSED ECOSYSTEM, ANIMAL GUT
J. Kikuchi¹, M. Yuki², T. Nobori², S. Moriya^3
1RIKEN Plant Science Center, Advanced NMR Metabomics Research Unit, Yokohama, Japan, ²Yokohama City University, Environmental Molecular Biology Laboratory, Yokohama, Japan, ³RIKEN, Biosphere Oriented Bioscience Research Unit, Yokohama, Japan

0376
ISOLATION OF CLASS 1 INTEGRONS FROM PRAWNS SOLD IN AUSTRALIA: EVIDENCE FOR THE ACQUISITION OF NEW MOBILE VIRULENCE GENES IN HUMAN COMMENSALS AND PATHOGENS
M. Labbate¹, N. Giguére², P. Roy Chowdhury¹, M. Holley³, H.W. Stokes¹, M. Gillings^3
1Macquarie University, Department of Chemistry and Biomolecular Sciences and Centre for Microbial Functional Networks, Sydney, Australia, ²University of Sherbrooke, Department of Biology, Sherbrooke, Canada, ³Macquarie University, Department of Biological Sciences, Sydney, Australia

0377
SWINE FECAL METAGENOMICS
R. Lamendella¹, D. Oerther¹, J. Martinson², J. Santo Domingo^3
1University of Cincinnati, Civil and Environmental Engineering, Cincinnati, United States of America, ²Environmental Protection Agency, NERL, Cincinnati, United States of America, ³Environmental Protection Agency, NRMRL, Cincinnati, United States of America

0378
BIOGENIC AMINES CONTENT AND HISTAMINE -RELATED BACTERIA IN TUNA FISH WASTES IN KOREA
S.S. Lee¹, P.R. Lee¹, C.N. Seong², C.O. Jeon^3
1Sunchon National University, Animal Science & Technology, Sunchon, Korea, Republic of, ²Sunchon National University, Biology, Sunchon, Korea, Republic of, ³Chung-Ang University, Life Science, Seoul, Korea, Republic of

0379
DETERMINATION OF SUPEROXIDE DISMUTASE OF THE INTESTINAL MICROFLORA IN FRESHWATER FISHES ENDEMIC TO LAKE BIWA
M. Wakayama, S. Yano, H. Noda, T. Tachiki
Ritsumeikan University, Department of Biotechnology, Kusatsu, Japan

0380
CHANGES IN THE BACTERIAL POPULATIONS FROM THE SHRIMP LARVAE MICROBIOTA DURING THE PHAGE THERAPY
S. Martínez-Diaz, A. Hipolito-Morales, R. Makarov
Centro Interdisciplinario de Ciencias Marinas, Technology Dept., La Paz, Mexico

0381
PROBIOTICS AND PREBIOTICS TO CONTROL SALMONELLA TYPHIMURIUM IN FARM ANIMALS
S. Martín-Peláez¹, S. Martín-Orúe¹, R.M. La Ragione², M.J. Woodward², R.A. Rastall³, G.R. Gibson³, A. Costabile^3
1Universitat Auto`noma de Barcelona, Department de Cie`ncia Animal i dels Aliments, Barcelona, Spain, ²Veterinary Laboratories Agency, Department of Food and Environmental Safety, Weybridge, United Kingdom, ³Food Microbial Sciences Unit, School of Chemistry, Food Biosciences and Pharmacy, Reading, United Kingdom

0382
COMPOSITION AND STRUCTURE OF BACTERIAL COMMUNITIES ASSOCIATED WITH THE UPPER RESPIRATORY TRACT OF THE ATLANTIC BOTTLENOSE DOLPHIN, TURSIOPS TRUNCATUS
W. Johnson¹, M. Torralba², K. Nelson², G. Bossart³, P. Fair⁴, P. Morris^1
1Medical University of South Carolina, Marine Biomedicine and Environmental Sciences Center and Hollings Marine Laboratory, Charleston, United States of America, ²J. Craig Venter Institute, Rockville, United States of America, ³Harbor Branch Oceanographic Institute, Marine Mammal Research and Conservation, Ft. Pierce, United States of America, ⁴NOAA National Ocean Service, Center for Coastal Environmental Health and Biomolecular Research, Charleston, United States of America

0383
META-EST ANALYSIS OF A SYMBIOTIC PROTISTAN COMMUNITY IN THE TERMITE GUT
S. Noda¹, K. Kurokawa², S. Tatsumoto³, Y. Sakaki³, A. Toyoda³, M. Ohkuma^1
1RIKEN, Environmental Molecular Biology Lab., Wako, Japan, ²Nara Institute of Science and Technology, Graduate School of Information Science, Ikoma, Japan, ³RIKEN, Sequence Technology Team, GSC, Yokohama, Japan

0384
METHICILLIN RESISTANT STAPHYLOCOCCI IN THE FARM ENVIRONMENT
C. O'Neill¹, W. Gaze¹, L. Tisi², P. Hawkey³, E. Wellington^1
1University of Warwick, Biological Sciences, Coventry, United Kingdom, ²Lumora Ltd, Cambridge, United Kingdom, ³Birmingham University, Division of Immunity and Infection, Birmingham, United Kingdom

0385
DIFFERENCES DOWN UNDER - METAGENOMIC ANALYSES OF THE FOREGUT MICROBIOME OF THE TAMMAR WALLABY (MACROPUS EUGENII)
P. Pope¹, C. Osborne¹, S. Denman¹, P. O'Cuiv¹, S. Tringe², L. Hind³, A.-D. Wright¹, P. Hugenholtz², C. McSweeney¹, M. Morrison^1
1CSIRO, Livestock Industries, St Lucia, Australia, ²Joint Genome Institute, Walnut Creek, United States of America, ³CSIRO, Black Mountain, Australia

0386
QUANTITATIVE ANALYSIS OF TWO ZOONOTIC PATHOGENS IN LIVESTOCK TO DETERMINE ROUTES OF INFECTION
D. Rapp¹, C. Ross¹, J. Waller², R.W. Muirhead^3
1AgResearch, Climate, Land and Environment, Hamilton, New Zealand, ²AgResearch, Bioinf Maths and Stats, Hamilton, New Zealand, ³AgResearch, Climate, Land and Environment, Mosgiel, New Zealand

0387
EFFECT OF DISTILLER'S GRAIN IN STEAM FLAKED CORN BASED DIETS ON THE FECAL MICROBIOTA OF BEEF CATTLE
W. Rice¹, W. Green², M. Galyean³, N.A. Cole^1
1USDA, ARS, CPRL, Bushland, United States of America, ²Texas A&M University, TAES, Amarillo, United States of America, ³Texas Tech University, Animal Science, Lubbock, United States of America

0388
ANALYSIS OF FERMENTIVE BACTERIA ALONG THE GASTROINTESTINAL TRACT OF THE CHILEAN HERBIVOROUS FISH APLODACTYLUS PUNCTATUS
P. Mardones, P. Navarrete, R. Espejo, J. Romero
INTA-Universidad de Chile, Laboratorio de Biotecnología, Santiago, Chile

0389
PARSING THE ALLOCHTHONOUS FROM THE AUTOCHTHONOUS FUNGAL BIOTA IN THE POULTRY INTESTINE
A. Scupham
National Animal Disease Center, USDA, ARS, Pre-Harvest Food Safety and Enteric Diseases, Ames, United States of America

0390
FUNCTIONAL MICROBIOMICS TOWARDS UNDERSTANDING HOST-MICROBE INTERACTIONS IN THE GASTROINTESTINAL TRACT OF THE DEVELOPING PIG
O. Perez¹, W. Pellikaan², M.W.A. Verstegen², W.M. de Vos¹, H. Smidt^1
1Wageningen University, Laboratory of Microbiology, Wageningen, Netherlands, ²Wageningen University, Animal Nutrition Group, Wageningen, Netherlands

0391
THE AFFECT OF AS(III) ON THE MICROBIAL COMMUNITY STRUCTURE OF THE MURINE COLON
R. Bansal¹, S. Williard¹, A. Straub², D. Stolz³, A. Barchowsky², J. Stolz^1
1Duquesne University, Biological Sciences, Pittsburgh, United States of America, ²University of Pittsburgh, Environmental and Occupational Health, Pittsburgh, United States of America, ³University of Pittsburgh, Cell Biology and Physiology, Pittsburgh, United States of America

0392
GUT BACTERIAL COMMUNITIES REFLECT THE FEEDING HABITS OF EARTHWORMS
D. Thakuria, D. Finan, O. Schmidt, D. Egan, F. M. Doohan
University College Dublin, UCD School of Biology and Environmental Science, Dublin, Ireland

0393
THE BACTEROIDES GROUP HAS DISTINCT COMMUNITY DYNAMICS DURING DEVELOPMENT OF THE GUT MICROBIOTA IN NEONATAL PIGS
C.L. Thompson, A.J. Holmes
School of Molecular & Microbial Biosciences,The University of Sydney, Camperdown, Australia

0394
TICK (IXODES RICINUS) - ASSOCIATED BACTERIAL COMMUNITIES FROM DIFFERENT FORESTS
L. Van Overbeek¹, F. Gassner², W. Takken^2
1Wageningen University and Research Centre, Plant Research International, Wageningen, Netherlands, ²Wageningen University and Research Centre, Entomology, Wageningen, Netherlands

0395
MASTITIS OCCURRENCE IN SHEEP MILK AND ITS RELATIONSHIP TO OTHER MILK PARAMETRS
M. Vyletelova¹, J. Riha², O. Hanus^2
1Agriresearch Rapotin Ltd., Vikyrovice, Czech Republic, ²Research Institute for Cattle Breeding, Ltd., Vikyrovice, Czech Republic

0396
BACTERIAL POPULATION DYNAMICS WITHIN THE RUMEN OF BOS INDICUS CATTLE AS DEMONSTRATED THROUGH DENATURING GRADIENT GEL ELECTROPHORESIS ANALYSIS
A. Wilson¹, A. Klieve¹, D. Poppi², D. Ouwerkerk¹, S. McLennan¹, T. Panjaitan², J. Kidd^1
1Queensland Department of Primary Industries and Fisheries, Animal Science, Moorooka, Australia, ²University of Queensland, School of Animal Studies, St Lucia, Australia

0397
MICROARRAY ANALYSIS OF A RUMINAL XYLANOYTIC BACTERIUM AND A METHANOGEN GROWN IN CO-CULTURE
C.J. Yeoman¹, W.J. Kelly², J. Rakonjac¹, Z. Kong², G.T. Attwood^2
1Massey University, Institute of Molecular Biosciences, Palmerston North, New Zealand, ²AgResearch Limited, Food and Textiles, Palmerston North, New Zealand

0398
UNCULTURED MICROBIAL POPULATIONS IN THE REUMEN OF SHEEP AND COWS
J. Stiverson¹, M. Kim¹, M. Morrison², Z. Yu^1
1The Ohio State University, Animal Sciences, Columbus, United States of America, ²The Ohio State University and CSIRO Livestock Industries, Australia, St Lucia, Australia

0399
AFFECT OF CORN GERM MEAL INCLUSION IN PIG DIETS ON BACTERIAL ECOLOGY IN THE CECUM AND PROXIMAL COLON
C. Ziemer, T. Weber, B. Kerr
NSTL-ARS-USDA, Ames, United States of America

0400
ARCHAEA IN THE INTESTINAL TRACT OF PIGS
C. Ziemer, T. Weber, B. Kerr
NSTL-ARS-USDA, Ames, United States of America